PhenotypeDB
Publications
Collaborators
S. Hake
V. Brendel
D. Jackson
E. Kellogg
T. Rocheford
R. Schmidt
E. Vollbrecht
Funding
NSF DBI-0110189
NSF DBI-0604923
Links
Project Data Portal
Publications
Upadyayula, N, J Wassom, MO Bohn, and TR Rocheford. QTL Analysis of Phenotypic Traits and Principal Components of Maize Tassel Inflorescence Architecture Theor Appl Genet.: Submitted.Satoh, N, N Nagasawa, ST Malcomber, H Sakai, and D Jackson. A trehalose metabolic enzyme controls inflorescence architecture in maize. Nature 441 (2006): 227-230.
Preston, JC, and EA Kellogg. Reconstructing the evolutionary history of paralogous APETALA1/FRUITFULL-like genes in grasses (Poaceae). Genetics 174 (2006): 421-37.
Malcomber, ST, and EA Kellogg. Evolution of unisexual flowers in grasses (Poaceae) and the putative sex-determination gene, TASSELSEED2 (TS2). New Phytologist 170 (2006): 885-899.
Reinheimer, R, ST Malcomber, and EA Kellogg. Evidence for distinct roles of the SEPALLATA gene LEAFY HULL STERILE1 in Eleusine indica and Megathyrsus maximum (Poaceae). Evolution and Development 8 (2006): 293-303.
Wang, B-B, and V Brendel. Genome-wide comparative analysis of alternative splicing in plants. Proc Natl Acad Sci U S A 103 (2006) 7175-7180.
Whipple, CJ, and RJ Schmidt. Genetics of grass flower development. Advances in Bot. Res. 44 (2006): 385-424.
Malcomber, ST, JC Preston, R Reinheimer, J Kossuth, and EA Kellogg. Developmental gene evolution and the origin of grass inflorescence diversity. Advances in Bot. Res. 44 (2006): 425-481.
Wang, B-B, and V Brendel. Molecular characterization and phylogeny of U2AF35 homologs in plants. Plant Physiol. 140 (2006): 624-636. Suppl.
Bortiri, E, D Jackson, and S Hake. Advances in maize genomics: the emergence of positional cloning. Curr. Opin. Plant Biol. 9 (2006): 1-8.
Upadyayula, N, HS da Silva, MO Bohn, and TR Rocheford. Genetic and QTL analysis of maize tassel and ear inflorescence architecture. Theor Appl Genet. 112 (2006): 592-606.
Bortiri, E, G Chuck, E Vollbrecht, T Rocheford, R Martienssen, and S Hake. ramosa2 encodes a LATERAL ORGAN BOUNDARY domain protein that determines the fate of stem cells in branch meristems of maize. Plant Cell. (2006): 574-585.
2005
Malcomber, ST, and EA Kellogg. SEPALLATA gene diversification: brave new whorls. Trends Plant Sci. 10 (2005): 427-435.Lunde, C, and S Hake. Florets and rosettes: meristem genes in maize and Arabidopsis. Maydica. (2005): in press
Bommert, P, C Lunde, J Nardmann, E Vollbrecht, M Running, D Jackson, S Hake, and W Werr. thick tassel dwarf1 encodes a putative maize ortholog of the Arabidopsis CLAVATA1 leucine-rich repeat receptor-like kinase. Development. 132 (2005): 1235-1245.
Vollbrecht, E, and B Sigmon. Amazing grass: developmental genetics of maize domestication. Biochem Soc Trans. 33 (2005): 1502-1506.
Vollbrecht, E, PS Springer, L Goh, ES 4th Buckler, and R Martienssen. Architecture of floral branch systems in maize and related grasses. Nature. 436 (2005): 1119-1126.Suppl.
Bommert, P, N Satoh-Nagasawa, D Jackson, and HY Hirano. Genetics and evolution of inflorescence and flower development in grasses. Plant Cell Physiol. 46 (2005): 69-78.
Chuck, G, and S Hake. Regulation of developmental transitions. Curr. Opin. Plant Biol. 8 (2005): 67-70.
Dong, Q, L Kroiss, FD Oakley, BB Wang, and V Brendel. Comparative EST analyses in plant systems. Methods Enzymol. 395 (2005): 400-418.
Gadberry, MD, ST Malcomber, AN Doust, and EA Kellogg. Primaclade--a flexible tool to find conserved PCR primers across multiple species. Bioinformatics. 21 (2005): 1263-1264.
Gupta, S, A Gallavotti, GA Stryker, RJ Schmidt, and SK Lal. A novel class of Helitron-related transposable elements in maize contain portions of multiple pseudogenes. Plant Mol Biol. 57 (2005): 115-127.
2004
Malcomber, ST, and EA Kellogg. Heterogeneous expression patterns and separate roles of the SEPALLATA gene LEAFY HULL STERILE1 in grasses. Plant Cell. 16 (2004): 1692-1706.Whipple, CJ, P Ciceri, CM Padilla, BA Ambrose, SL Bandong, and RJ Schmidt. Conservation of B-class floral homeotic gene function between maize and Arabidopsis. Development. 131 (2004): 6083-6091.
Gallavotti, A, Q Zhao, J Kyozuka, RB Meeley, MK Ritter, JF Doebley, ME Pe, and RJ Schmidt. The role of barren stalk1 in the architecture of maize. Nature. 432 (2004): 630-635. Suppl.
Hake, S, and T Rocheford. Exploiting quantitative trait loci in gene discovery. Genes Dev. 18 (2004): 597-601.
Kellogg, EA. Evolution of developmental traits. Curr. Opin. Plant Biol. 7 (2004): 92-98.
Kellogg, EA, and JL Bennetzen. The evolution of nuclear genome structure in plants. Am. J. Bot. 91 (2004): 1709-1725.
2003
Bomblies, K, RL Wang, BA Ambrose, RJ Schmidt, RB Meeley, and J Doebley. Duplicate FLORICAULA/LEAFY homologs zfl1 and zfl2 control inflorescence architecture and flower patterning in maize. Development. 130 (2003): 2385-2395.
2002
Chuck, G, M Muszynski, E Kellogg, S Hake, and RJ Schmidt. The control of spikelet meristem identity by the branched silkless1 gene in maize. Science. 298 (2002): 1238-1241. Suppl.Laudencia-Chingcuanco, D, and S Hake. The indeterminate floral apex1 gene regulates meristem determinacy and identity in the maize inflorescence. Development. 129 (2002): 2629-2638.
Ritter, MK , CM Padilla, and RJ Schmidt. The maize mutant, barren stalk1, is defective in axillary meristem development. Am. J. Bot. 89 (2002): 203-210.